• Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity: Overview and Recommendations 

      Capo, Eric; Giguet-Covex, Charline; Rouillard, Alexandra; Nota, Kevin; Heintzman, Peter D.; Vuillemin, Aurèle; Ariztegui, Daniel; Arnaud, Fabien; Belle, Simon; Bertilsson, Stefan; Bigler, Christian; Bindler, Richard; Brown, Antony G.; Clarke, Charlotte L.; Crump, Sarah E.; Debroas, Didier; Englund, Göran; Ficetola, Gentile Francesco; Garner, Rebecca E.; Gauthier, Joanna; Gregory-Eaves, Irene; Heinecke, Liv; Herzschuh, Ulrike; Ibrahim, Anan; Kisand, Veljo; Kjær, Kurt H.; Lammers, Youri; Littlefair, Joanne; Messager, Erwan; Monchamp, Marie-Eve; Olajos, Fredrik; Orsi, William; Pedersen, Mikkel W.; Rijal, Dilli P.; Rydberg, Johan; Spanbauer, Trisha; Stoof-Leichsenring, Kathleen R.; Taberlet, Pierre; Talas, Liisi; Thomas, Camille; Walsh, David A.; Wang, Yucheng; Willerslev, Eske; van Woerkom, Anne; Zimmermann, Heike H.; Coolen, Marco J. L.; Epp, Laura S.; Domaizon, Isabelle; Alsos, Inger G.; Parducci, Laura (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-02-13)
      The use of lake sedimentary DNA to track the long-term changes in both terrestrial and aquatic biota is a rapidly advancing field in paleoecological research. Although largely applied nowadays, knowledge gaps remain in this field and there is therefore still research to be conducted to ensure the reliability of the sedimentary DNA signal. Building on the most recent literature and seven original ...
    • Metagenomics: A viable tool for reconstructing herbivore diet 

      Chua, Physilia Y. S.; Crampton-Platt, Alex; Lammers, Youri; Alsos, Inger G.; Boessenkool, Sanne; Bohmann, Kristine (Journal article; Tidsskriftartikkel; Peer reviewed, 2021-05-10)
      Metagenomics can generate data on the diet of herbivores, without the need for primer selection and PCR enrichment steps as is necessary in metabarcoding. Metagenomic approaches to diet analysis have remained relatively unexplored, requiring validation of bioinformatic steps. Currently, no metagenomic herbivore diet studies have utilized both chloroplast and nuclear markers as reference sequences ...
    • New integrated molecular approaches for investigating lake settlements in north-western Europe 

      Brown, Antony; Fonville, Thierry; van Hardenbroek, Maarten; Cavers, Graeme; Crone, Anne; McCormick, Finbar; Murray, Emily; MacKay, Helen; Whitehouse, Nicki J.; Henderson, Andrew C.G.; Barratt, Phil; Davies, Kim; Langdon, Peter; Alsos, Inger G.; pirrie, Duncan; Head, Katie (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-09-28)
      Lake settlements, particularly crannogs, pose several contradictions—visible yet inaccessible, widespread yet geographically restricted, persistent yet vulnerable. To further our understanding, we developed the integrated use of palaeolimnological (scanning XRF, pollen, spores, diatoms, chironomids, Cladocera, microcharcoal, biogenic silica, SEM-EDS, stable-isotopes) and biomolecular (faecal ...
    • Stay or go – how topographic complexity influences alpine plant population and community responses to climate change 

      Graae, Bente Jessen; Vandvik, Vigdis; Armbruster, W. Scott; Eiserhardt, Wolf L.; Svenning, Jens-Christian; Hylander, Kristoffer; Ehrlén, Johan; Speed, James D.M.; Klanderud, Kari; Bråthen, Kari Anne; Milbau, Ann; Opedal, Øystein Hjorthol; Alsos, Inger G.; Ejrnæs, Rasmus; Bruun, Hans Henrik; Birks, H. John B.; Westergaard, Kristine Bakke; Birks, Hilary H; Lenoir, Jonathan (Journal article; Tidsskriftartikkel; Peer reviewed, 2017-11-11)
      In the face of climate change, populations have two survival options − they can remain in situ and tolerate the new climatic conditions (“stay”), or they can move to track their climatic niches (“go”). For sessile and small-stature organisms like alpine plants, staying requires broad climatic tolerances, realized niche shifts due to changing biotic interactions, acclimation through plasticity, or ...